Cost was the reason i first started looking at AIO's. The Quattro 48/3000 runs about $1400 for one. A EG4 6000xp also runs about $1400. But to equal the power you would need 2 Quatto's and at least 2 solar contoller/chargers. You would also need ac and dc circuit breakers. One EG4 6000xp includes all of those items. You could also use a Quattro 5000 but that does quite equal the power of the 6000xp and you would still need all that other stuff mentioned. It does does have shore power and generator inputs however as described before it must be 240v inputs or it just does not behave properly. The chargverter seems to solve this problem. The added benefit is the Chargverter cleans up any dirty power to a clean power. Sometimes generators if not operated at their optimal speed can produce a dirty ac sinewave which can eventaully cause damage to the inverter. You could use two EG4 3000 inverters with almost the same results but the 6000xp has fantastic surge capabilities which i am hoping will help with ac unit start ups without soft starts, saving another $1000.OP, given what you wrote about wiring the 6000XP to shore power and generator, why are you using a 6000XP?
A Victron Quattro can accept both shore power and generator inputs. In has two AC-in ports. It will also charge a 48 volt battery without the need for a Chargerverter. Unless you have an on-board generator, you don't need two AC-in ports, just one for the shore power since you'll plug the shore power cord into your portable generator. In that case, get a Multiplus, not a Quattro.
I'm not sure why you need an Inverter/bypass switch.
There should be a dual pole breaker between the solar charge controller (6000XP in this case) and the solar panels.
On your second Lynx Power In, you don't need two disconnects. Just one, on the positive leg.
I'm running a Quattro 48/3000 in my camper with a DIY 280 Ah 48v battery. A Victron Orion Tr 48-12 provides power to the camper's 12 volt system.
Check the idle draw of the 6000XP. All-in-one units often has such a high idle draw that they don't make sense for mobile situations.
I have upgraded my plans for 4 48v 100ah batteries. Just have not changed the diagram.The diagram shows only three batteries. The point being that the more efficient your components are, the less you have to spend on everything else.