After dark I turned off all the loads side of the SI, voltage was still present. I put a traditional lightbulb on the leads with the voltage and the only thing I noticed was the SPD connected to AC2 would change in intensity which is interesting. I wonder if the SPD is feeding a voltage to AC2 ... I will remove it later to check this case as well.
Update, I disconnected the SPD and the phantom voltage disappeared. Looking at the SPD it is a 300VDC not AC SPD by MN solar so that could be cause.
SPD is MOV, which has some capacitance. Maybe this completes a resonant circuit with other parasitic elements.
What you are calling 'warmup' is phase locking search. The inverter will slowly change its AC frequency, scanning up and down in frequency in an attempt to get within capture range of phase locking and tracking by the inverter.
Sunny Island has a programmed warm-up period before connecting, and cool-down before shutting generator off.
The frequency synchronization is performed when it wants to connect. I've observed that with grid, have never used generator.
According to documentation, it first raises frequency high enough to knock Sunny Boy offline so it doesn't have to deal with unwanted power while it is down around 60 Hz for synchronization. Sunny Boy is returned to UL-1741 by RS-485 signaling (if it is an older model, not newer with Rule-21). It remains offline for 5 minutes before reconnecting.
Although I haven't seen SI lose the race, I did observe that SI raises frequency to 65 Hz and knocks SB offline the moment it has qualified input AC as good. It then drops to 59 Hz (used to correct mechanical clocks) and waits its own 5 minutes before synchronizing (to grid, don't know delay for generator.)
With old UL-1741 Sunny Boy, 59 Hz is also out of spec, so it doesn't start its 5 minute countdown. With UL-1741-SA Sunny Boy, 58.7 Hz is lower limit of spec, so Sunny Boy and Sunny Island are both on a 5 minute timed race to connect. I've been concerned that Sunny Boy would connect first, but didn't see that happen. In the event of unstable generator rather than stable grid, the 5 minute timer might elapse for both.
I've widened my Sunny Boy grid frequency range to the 59.7 ... 60.5 Hz range of UL-1741-SA and have not seen them reconnect too soon.
Re running all gen experiments now with current generator on site but nothing seems to work yet. Currently getting GnFailLock, no reasons provided, so I assume it failed to sync. This is with a load applied to the gen before "starting" generator, and without.
OK, you've tried loading the generator during the time Sunny Island is waiting to connect?
I thought that might make RPM more stable, but apparently didn't fix the issue.
I've thought about transformer-isolating AC (from grid or generator) rectifying it, and feeding PV input of another Sunny Boy (with frequency-watts ramp from 60.5 Hz to 61.0 Hz, assuming others are older ones with off-grid 61.0 Hz to 62.0 Hz ramp.) An AC coupled Chargeverter. Be careful about capacitor inrush current; Sunny Boy is intended for relatively low current sources like PV or turbine.